BULLETIN OF MARINE SCIENCE, 80(3): 567–586, 2007
567
Bulletin of Marine Science
© 2007 Rosenstiel School of Marine and Atmospheric Science
of the University of Miami
MANGROVES AS ESSENTIAL NURSERY HABITAT FOR
GOLIATH GROUPER EPINEPHELUS ITAJARA
Christopher C. Koenig, Felicia C. Coleman,
Anne-Marie Eklund, Jennifer Schull, and Jeffrey Ueland
ABSTRACT
We evaluated goliath groupers [Epinephelus itajara (Lichtenstein, 1822)] use of
mangroves as essential nursery habitat by estimating absolute abundance, density,
survival, age structure, home range, mangrove habitat association, habitat quality,
and recruitment to the adult population. Densities (numbers km
–1
mangrove shore-
line) were calculated using Jolly-Seber mark-recapture methods for mangrove-lined
rivers and mangrove islands of the Ten ousand Islands (TTI) and Everglades Na-
tional Park, which includes Florida Bay, Florida, USA. Juveniles had smaller home
ranges around islands (170 m) than in rivers (586 m), as determined from observa-
tions on telemetered fish. Goliath grouper remained in mangrove habitats for 5–6
yrs (validated ages from dorsal spine sections), then emigrated from mangroves at
about 1.0 m total length. In the TTI, juvenile densities around mangrove islands
were higher (mean = 25 km
–1
, SE = 6.2, CV = 0.5) and less variable than those in riv-
ers (mean = 11 km
–1
, SE = 4.2, CV = 1.2). Density was negatively correlated with the
frequency of dissolved oxygen and salinity minima. Mean growth rate of recaptured
fish around mangrove islands (0.358 mm d
–1
, 95% CL = 0.317–0.398) was signifi-
cantly higher than that in rivers (0.289 mm d
–1
, 95% CL = 0.2690.308). e annual
survival rate, as estimated by the Kaplan-Meier method on telemetered fish, was
0.947 (95% CL = 0.834–1.0). Very low densities in Florida Bay were probably related
to other water-quality variables in this human-altered system. e offshore abun-
dance of adults was largely explained by abundance of mangrove, but not seagrass
habitat. Mangrove habitat with suitable water conditions, which appears essential to
the recovery and sustainability of goliath-grouper populations, should be protected
and/or restored.
Nearshore estuarine habitats are thought to provide essential
1
nursery habitat
for many fish species (Kapetsky, 1985; Koenig and Coleman, 1998; orrold et al.,
1998; Fitzhugh et al., 2005), but definitive tests of the nursery role rarely occur (Beck
et al., 2001). Conrmation of the nursery role requires an understanding of the focal
species’ life history and a thorough evaluation that culminates in demonstration of
the habitat’s greater contribution per unit area to the production of the adult popula-
tion (Beck, 1995; Beck et al., 2001; Laegdsgaard and Johnson, 2001; Nagelkerken et
al., 2002; Halpern, 2004a,b). is conrmation is critical from a conservation per-
spective because it provides a distinction between source and sink habitats; source
habitats are currently the primary focus of efforts to protect shery production
(Crowder et al., 2000).
In this study, we tested the hypothesis that mangroves are integral and essential to
the early life stages of goliath grouper [Epinephelus itajara (Lichtenstein, 1822)] by
pursuing four objectives: (1) estimating juvenile density, survival, growth, and move-
1
roughout the present paper, “essential” is used in the sense of the Sustainable Fisheries Act, wherein
essential sh habitat” is defined as “those waters and substrate necessary to sh for spawning, feeding,
or growth to maturityand “necessarymeans “required to support a sustainable shery and the man-
aged species’ contribution to a healthy ecosystem.”
BULLETIN OF MARINE SCIENCE, VOL. 80, NO. 3, 2007
568
ment patterns in the Ten ousand Islands (TTI), southwest Florida; (2) comparing
our estimates of density in the TTI with abundance estimates from published and
unpublished sampling records from other estuarine and offshore habitats; (3) com-
paring the effects of water condition on densities in mangrove habitats of the TTI, in
rivers of the Everglades National Park (ENP), and in Florida Bay (FB), a system altered
by human activities; and (4) investigating the relative importance of juvenile habitat
to adult production by correlating regional near-shore habitat coverage with offshore
adult abundance.
S A
e goliath grouper is the largest grouper in the western North Atlantic. It ma-
tures in 57 yrs, is long-lived (surviving up to 37 yrs), and reaches sizes exceeding
400 kg and 3.0 m total length (TL) (Robins et al., 1986; Bullock et al., 1992). Its life
cycle includes ontogenetic shifts in habitat use: larvae move from the pelagic envi-
ronment to shallow coastal areas, benthic juveniles live in estuaries, and adults occur
on offshore reefs (< 50 m deep) (Eklund and Schull, 2001).
Goliath grouper is considered by the World Conservation Union (IUCN) to be
critically endangered throughout its range which extends from the west coast of Af-
rica to the west coast of Central America including the Caribbean, and from Brazil
to the southeastern U.S. (Heemstra and Randall, 1993; IUCN Red List, 2006, [http://
www.iucnredlist.org/search/search-basic]). A shing ban was put into effect in the
southeastern U.S. in 1990 by the South Atlantic and the Gulf of Mexico fishery man-
agement councils and in the Caribbean in 1993 by Caribbean Fishery Management
Council because it was considered to be severely overfished (GMFMC, 1990; Sadovy
and Eklund, 1999). Although the National Marine Fisheries Service (NMFS) contin-
ues to list this species as overfished (NMFS, 2004), the actual status of the popula-
tion remains unknown and difficult to assess (Porch and Eklund, 2004), as is often
the case with fully protected species for which fisheries data collection has not been
replaced with reliable population monitoring. is situation hinders development of
management measures aimed at rebuilding the population, ending overfishing, or
both, as required by the Sustainable Fisheries Act (Public Law 104-297).
S S
Study sites in the TTI and ENP (Fig. 1A) occurred in red mangrove (Rhizopho-
ra mangle Linnaeus) habitat along the shorelines of islands, tidal rivers and passes,
and shallow bays. e TTI system covers 1924 km
2
between latitudes 25°40´N and
26°00´N and longitudes 081°20´W and 0840´W. e ENP covers the southern tip
of the Florida peninsula and extends through FB, the largest (2072 km
2
)
subtropical
estuary in North America (Loftus, 2000).
In both systems, we haphazardly chose widely dispersed study locations primar-
ily on the basis of accessibility (sites were often accessible only at high tides). In
the TTI, we sampled seven rivers (Littlewood, Palm, Blackwater, Pumpkin, Wood,
Whitney, and Ferguson), three man-made canals (92 Canal East, 92 Canal West, and
Faka Union Canal), and four mangrove-island systems (Remuda Ranch, Russell Key,
Fakahatchee, and Rabbit Key) (Fig. 1B). Water depths averaged < 0.1 to 2.0 m (MLW),
reaching 5 m in passes. Mixed diurnal tides range from 2.9 ft at Naples to 4.5 ft
KOENIG ET AL.: JUVENILE GOLIATH GROUPER HABITAT
569
Figure 1. Study sites in southwest Florida, USA. A. Areas covered by the present study and Flor-
ida coastal regions as delimited for Reef Environmental Education Foundation surveys. B. Ten
Thousand Islands system, showing sites used in the present study (those marked with asterisks are
man-made). River and canal sites: (A) 92 Canal West,* (B) 92 Canal East,* (C) Palm River, (D)
Blackwater River, (E) Whitney River, (F) Pumpkin River, (G) Little Wood River, (H) Faka Union
Canal,* (I) Ferguson River. Passes: (1) Remuda Ranch Channel, (2) Fakahatchee Pass, (3) Russell
Pass, (4) Rabbit Key Pass. C. Everglades National Park system. Rivers: (A) Lostmans River, (B)
Broad River, (C) Harney River, (D) North Prong River, (E) Shark River, (F) Roberts River. Bay
sites: (1) Bob Allen Key, (2) Black Betsey Key, (3) Little Buttonwood, (4) Blackwater Sound. Gray
= land; white = water.
BULLETIN OF MARINE SCIENCE, VOL. 80, NO. 3, 2007
570
at the Shark River (NOAA tide tables). Undercuts (= scoured shorelines) formed a
structurally complex habitat in sampled areas, especially around mangrove islands
where mangrove roots formed curtains” and submerged dead trees provided ad-
ditional habitat structure. e ENP study sites included six rivers (Harney, Broad,
Shark, Roberts, Lostman’s, and North Prong) entering the Gulf of Mexico and four
mangrove-island sites (Blackwater Sound, Little Buttonwood Sound, E. Bob Allen
Key, and Black Betsy Key) in FB (Fig. 1C). e river sites in the TTI and ENP differed
little in appearance, whereas the TTI mangrove island sites differed from those in
the ENP in being shallower and more widely spaced and having fewer undercuts.
M  M
J
Capture. In the rivers, we captured sh using blue-crab traps and commercial grouper
fish traps baited with dead striped mullet (Mugil cephalus Linnaeus, 1758). Blue-crab traps
were 61 cm wide by 61 cm long by 46 cm high and made of 3.8-cm, 17.5-gauge plastic-coated
wire mesh; two funnels, each 13 cm long (proximal opening 19 × 12.7 cm; distal opening, 18 ×
7.6 cm), led from the outside into a lower chamber, and two funnels, each 10 cm long (proxi-
mal and distal openings, 18 × 7.6-cm) led from the lower chamber into an upper chamber.
e sh traps were 61 cm wide by 107 cm long by 46 cm high. e top and bottom panels
were 3.8-cm, 12.5-gauge plastic-coated wire mesh, and the side panels 2.5 × 5.2-cm, 14-gauge
wire mesh. e single entry funnel was 53 cm long (proximal opening, 45.7 × 30.5 cm; distal
opening, 30.5 × 10.2 cm).
We deployed 50 traps in each river at 93-m (0.05 NM) intervals in a linear sequence 4.6 km
(2.5 NM) long (Figs. 2A,B). e line of traps extended up each river from the mouth, except in
rivers shorter than 4.6 km, such as the Pumpkin, Little Wood (Fig. 2B), and Whitney, where
it extended past the river mouth into the bay. Trap spacing was arbitrary, but small enough
to maximize catch and large enough to sample most of the river or canal. Each deployment
lasted 21 d (sampled at 7 d intervals), with inter-deployment intervals about 42 d. Capture-ef-
ficiency studies during the first year identified the peak capture period for subsequent sam-
pling: captures per set from June through November (105/1365 = 0.077) were significantly
greater (binomial test, P < 0.0001) than those from January through May (6/460 = 0.013).
We sampled mangrove-island shorelines monthly during the summer and fall, mostly at
neap tides, using setlines (Fig. 2C). Each setline was composed of a baited 14-0 circle hook
attached by a 10-cm piece of 600-lb. test monofilament (which minimized hook electrolysis)
to a 500-lb. test stainless steel cable attached to a 4-cm long section of 20 cm diam PVC pipe
(as a reel and an aid in relocating the setlines), which was attached to a mangrove limb. At
least three setlines were used per site (24–27 lines per sampling area). Each sampling event
included at least two bait-and-sample rounds, each 4–12 hrs in duration.
We tagged each newly captured sh ventrally with an individually numbered stainless-
steel-core internal-anchor tag (Floy Tag Company) and removed the third dorsal-fin spine
and second and third dorsal-fin rays for age determination (Fig. 3). Records for each fish cap-
tured or recaptured included the time, date, tag number, weight (g), size (mm total length,
TL), capture location (Trimble GeoExplorer GPS receiver in Arcview 8 GIS), and evidence
of previous spine and ray removal. We recaptured fish ourselves, but we included a toll-free
telephone number on each tag so that others could also report captures.
Age, Growth, and Tag Loss.Collected spines were cleaned and dried, and several trans-
verse 0.5 mm sections were cut from each (Beuhler low speed isomet saw) 5–10 mm above the
spine base. e sections were mounted on slides, and two readers independently determined
age by counting translucent bands (= annuli) under compound dissecting microscopes. e
spine-aging method was validated by comparison with ages determined from otoliths and
by determination of incremental change over time from additional spines collected from re-
KOENIG ET AL.: JUVENILE GOLIATH GROUPER HABITAT
571
Figure 2. Examples of capture sites for juvenile goliath grouper, Epinephelus itajara in the Ten
Thousand Islands. (A) trap sampling in the Palm River. (B) trap sampling in the Little Wood
River. (C) setline sampling in Russell Pass. Traps were set at 0.093-km intervals. Sites of capture
(small closed circles) and no capture (small open circles) are indicated along with home range
(larger open circles) around capture sites. Gray = land; white = water.
BULLETIN OF MARINE SCIENCE, VOL. 80, NO. 3, 2007
572
captured sh that were either marked with oxytetracycline (50 IU kg
–1
) or not (Brusher and
Schull, unpubl. data). Growth rates (average daily increase in length, mm day
–1
) were esti-
mated from recaptured fish. To minimize the effects of measurement error on growth rate we
used only recaptured fish at liberty for > 30 d (n = 259). Growth was assumed to be linear over
the size range of juveniles captured in the study (following Bullock et al., 1992). Growth rate
dierences among sites were tested for significance with the Kruskal-Wallis non-parametric
test (no normalizing transformation was found). Where data were normal (Shapiro-Wilk
test), ANOVA was used to test for differences. Tag loss was indicated by evidence of previous
spine and ray removal in untagged fish.
Absolute Abundance and Survival.—To estimate juvenile absolute abundance and survival,
we used Jolly-Seber (J-S) mark-recapture methods (Krebs, 1999), the assumptions of which are
(1) that every individual in the sampled population has the same capture probability (equal
catchability); (2) that every marked individual has the same probability of surviving between
sampling times; (3) that no tag loss occurs during the sampling period. It also requires that
sampling time be short relative to intervals between samples (a feature built into our sam-
pling design), that at least three sampling times occur for each site, and that a relatively high
proportion (~ 0.50) of fish be marked.
We knew a priori that satisfying the equal catchability assumption would be difficult be-
cause no single gear type uniformly sampled the entire juvenile size range (20–1000 mm
TL). (We collected newly settled juvenile goliath grouper at about 20 mm TL in multiple
locations in mangrove leaf litter, but could not include them in the J-S abundance estimate
due to collection gear limitations. However, they were included in the estimates of overall
absolute abundance and density.) Traps worked in rivers but not around mangrove island
undercuts, where they were dislodged by swift currents and rapidly fouled. Despite this bias
and the potential diculty of distinguishing habitat-specific size (or age) distributions from
gear selectivity, we pursued multigear sampling to ensure capture of a greater size range (and
therefore age spectrum) of fish.
We tested for equal catchability within the selection limits of the gear with the zero-trun-
cated Poisson test and then compared the observed and expected frequency distributions
using a chi-squared goodness-of-fit test (Krebs, 1999).
Figure 3. Juvenile goliath grouper Epinephelus itajara (38 cm TL) caught by sh trap in the Ten
Thousand Islands. Note tag on abdomen. Photograph by M. Finn.
KOENIG ET AL.: JUVENILE GOLIATH GROUPER HABITAT
573
We estimated absolute abundance for all sizes, 20–1000 mm TL and for all ages, 0–6, pres-
ent in the mangroves (N
A
) (1) for trap sampling, by determining site-specific abundances of
2-yr-olds, the age most often selected by traps (= mean proportion of 2-yr-olds caught × N
J-S
in
each river), and (2) for setline sampling, by determining the site-specific abundances of 4-yr-
olds, the age most often selected by setlines (= mean proportion of 4-yr-olds caught × N
J-S
at
each mangrove island site). We calculated the number in each age group by reconstructing all
age groups (ages 0–5) based on M = 0.05, our Kaplan-Meier estimate of survival (see below),
then summing to obtain the absolute abundance of all age groups at each sampling site during
the sampling period. We did not include age 6 in the calculation because most sh appeared
to leave the mangroves in their fifth year (Table 1).
To ensure equal probability of survival from one sampling time to the next we made sure
that all released sh were in good condition. We estimated survival in two ways: (1) with
mark-recapture and the J-S method, and (2) with telemetry and the Kaplan-Meier method
(Krebs, 1999). J-S survival estimates, which depend only on the marked population, can be
confounded by many factors related to the behavior of the sh and/or the sampling design.
For example, if marked individuals emigrate, or for some reason cannot be recaptured (e.g.,
they outgrow the sampling gear or actively avoid recapture), they are assumed by the model to
have died. e Kaplan-Meier survival estimate does not have such limitations and makes use
of all the relocation data until the fish either dies or is lost from the sample.
Density, Habitat Association, and Home Range.—We estimated home range by tagging 22
juveniles (size range 430–940 mm TL) intraperitoneally with individually coded transmitters
(Sonotronics; battery life 48 mo) and relocating them during our normal sampling activities
over the period of the study. We assumed that tracking fish telemetrically left them relatively
undisturbed and therefore provided more reliable information on movement patterns and
home ranges than recaptures with traps or setlines, which could affect their behavior.
So that telemetered sh could be recognized externally, a numbered internal-anchor tag
with external streamer was placed on either side of the incision, which was closed with stain-
less steel medical staples and covered with antibiotic salve before the fish was released.
We relocated telemetered fish with a directional hydrophone (Sonotronics), recorded posi-
tions, and conrmed that detected fish were still alive by direct observation using SCUBA or
by prodding. We then estimated home range (= distance traversed by an individual during
the sampling period) by averaging the greatest straight-line distances between relocation sites
(White and Garrott, 1990). Half of the home range was equivalent to the radius of a circle
centered on the sampling site (Seber, 1982). Home ranges were estimated separately for rivers
and islands. Densities (D) were determined from
DnH
A
1
=
-
(1)
Table 1. Size and age distribution of juvenile goliath grouper, Epinephelus itajara, in mangrove-
lined rivers and mangrove islands of the Ten Thousand Islands, southwest Florida, USA, 1998–
2000. All sh caught in rivers were taken in traps; those caught near mangrove islands were taken
with setlines. Data are numbers of individuals; TL = total length.
TL (mm) Age 0 Age 1 Age 2 Age 3 Age 4 Age 5 Age 6 Tot a l
101200 1 8 3 25 37
201–300 3 90 107 108 3 311
301– 400 52 239 100 9 400
401500 1 81 48 17 2 149
501 600 8 21 36 3 68
601–700 4 8 34 11 1 58
701800 3 22 17 2 44
801–900 15 17 2 34
9011,000 6 7 2 15
Total n 4 151 442 313 142 57 7 1,116
BULLETIN OF MARINE SCIENCE, VOL. 80, NO. 3, 2007
574
where n
A
= estimated absolute abundance for all size classes (201000 mm TL) and H =
kilometers of mangrove shoreline within the home range about each sampling area.
Patterns of dispersion were estimated by use of the coefficient of dispersion (CD, variance
to mean ratio), where means and variances were calculated from the number of fish captured
at each sampling site over the 2 yr sampling period.
Water Condition.—We evaluated the relationship between dissolved oxygen (DO, mg L
–1
)
and salinity and fish density using 5 yrs of water quality data (1997–2001) collected monthly
near or at our sampling sites from the surface and bottom (total samples = 116120 per site)
by the South Florida Water Management District and archived on websites [http://www.sf-
wmd.gov/org/ema/envmon/wqm/coastal/tti.html and http://www.sfwmd.gov/org/ema/en-
vmon/wqm/flab/flabindex.html]. We assumed that salinity and DO were among the most
important variables affecting fish distribution in these systems. We did not include tempera-
ture minima in this analysis—even though goliath grouper are sensitive to low temperatures
(Sadovy and Eklund, 1999)—because any cold fronts moving through the area would affect
the entire SW Florida system, not just individual sites within the system. e State of Florida
minimum DO water quality standard for marine waters is 4 mg L
–1
, but we used 3 mg L
–1
to
reflect the dynamic diurnal and seasonal conditions in estuarine habitats. e State of Florida
has no salinity standards for estuaries, so we used lower (salinity of 5) and upper (salinity of
40) limits known for other serranid fishes found in estuaries (e.g., gag, black sea bass, and red
grouper) (Koenig and Coleman, 1998; Atwood et al., 2001).
A
Abundance.—We used goliath grouper sighting frequency data as a proxy for adult popu-
lation abundance rather than population-density data to minimize the effects of feeding or
reproductive aggregations on regional estimates. We determined sighting frequency based on
dive surveys conducted by e Reef Environmental Education Foundation (REEF) on Florida
reefs from 1993 to 2004 (REEF database = http://www.reef.org/data/twa/index.htm). REEF
surveyors use a standardized “roving diver method” in which divers swim freely through sites,
recording every observed sh species that can be positively identified. Because adult goliath
grouper are distinct in terms of size, shape, and color pattern, we are confident that both
novice and expert surveyors made correct identifications.
We compared goliath grouper sighting frequency off Florida with the abundance of two
major estuarine habitat types in coastal Florida, mangrove habitat (data from the Florida Nat-
ural Areas Inventory, available at http://www.fnai.org/about.cfm) and seagrass habitat (data
from Florida Fish and Wildlife Conservation Commission’s Fish and Wildlife Research Insti-
tute), using a logistic regression model to determine the significance (P < 0.05), direction, and
strength of the relationship (R
2
) between the variables.
R
A, G,  T L.—Juvenile goliath grouper (n = 1116) were found in
mangrove habitat up to age 6 and 1000 mm TL (Table 1). e overall mean growth
rate for all recaptured fish was 0.300 mm d
–1
(95% CL = 0.282–0.318, n = 259). In the
TTI, growth rates were not significantly different among rivers (Kruskal-Wallis, P >
0.05) nor among mangrove-island sites (Kruskal-Wallis, P > 0.05), but growth rates
around islands (mean = 0.358 mm d
–1
, 95% CL = 0.3170.398, n = 41) were signifi-
cantly greater (Kruskal-Wallis, P < 0.01) than growth rates in rivers (mean = 0.289
mm d
-1
, 95% CL = 0.269–0.308, n = 218). We found no significant (Kruskal-Wallis, P
> 0.05) relationship between growth rate and population density among rivers, nor
among island sites.
Tag loss was negligible (n = 1), all fish were released in good condition, and recap-
tured fish did not have infected tagging wounds.
KOENIG ET AL.: JUVENILE GOLIATH GROUPER HABITAT
575
A A  S
Equal Catchability.—Although TTI goliath grouper met the general assumption
of equal catchability (within the selective limits of the gear; zero-truncated Poisson
test; χ
2
, P > 0.05), all three gears showed some size (= age) selectivity (ANOVA, P <
0.05; Fig. 4). Crab traps selected primarily sh 300400 mm TL because the fun-
nel opening excluded larger individuals and the mesh size allowed smaller ones to
escape during trap retrieval. Fish traps were less selective at the upper size range but
also allowed fish < 200 mm TL to escape. Setlines captured primarily fish 5001000
mm TL and appeared to exclude fish < 400 mm TL.
Absolute Abundance.—Because of gear selectivity, the J-S method only estimated
the absolute abundance of the selected sizes for each gear type. ese were calcu-
lated directly by the J-S method and indirectly with a predictive model (Table 2; Fig.
5) based on catch per unit effort (CPUE; one unit of effort = one set of traps 4.6 km
long), such that:
..YX79 51=- +
(2)
where Y is the absolute abundance and X is the mean CPUE for the sampling site
(Linear Regression, P < 0.05, R
2
= 0.89). e CPUE model was developed from annual
J-S estimates of absolute abundance of trap catches for 1999 and 2000 for six rivers.
[We did not include Little Wood River because the sh in that river were unusually
abundant and highly clumped (Fig. 2B); such a situation produced a low CPUE rela-
tive to absolute abundance because traps saturated in high density areas around the
river mouth]. e regression model provided an efficient means of estimating abun-
dance outside of the TTI system and in areas where capture frequencies were too low
for direct use of the J-S method.
Estimating the abundance over all sizes (and therefore all gears) required accept-
ing three assumptions: (1) that all sizes were present in river and island systems, (2)
that year-class strength was constant among sampling years, and (3) that mortality
was uniform across all age groups. e rst assumption is justified because in our
collections, fish sizes ranged from 20 to 800 mm TL in rivers and 20 to 930 mm TL
Figure 4. Percent frequency of size classes of juvenile goliath grouper Epinephelus itajara cap-
tured by each of the three gear types in the Ten Thousand Islands. TL = total length.
BULLETIN OF MARINE SCIENCE, VOL. 80, NO. 3, 2007
576
Table 2. Mean estimates of absolute abundance (n), survival probability (PHI), and density (D) of
juvenile goliath grouper, Epinephelus itajara, sampled in mangrove shoreline of the Ten Thou-
sand Islands (TTI), Everglades National Park (ENP), and Florida Bay (FB), southwest Florida,
USA, 1998–2001. Density estimates include all sh 201,000 mm SL (ages 0–5). S = number
of sampling times. α = maximum proportion of population marked. n
J-S
= age-specic absolute
abundance estimate based on Jolly-Seber model. PHI = nite probability of survival standardized
to 30 d. n
A
= absolute abundance based on all ages, with annual mortality (M) of 0.05. H = area
sampled in kilometers of mangrove shoreline.
System S α n
J-S
(95% CL)
PHI
(95% CL)
n
A
(M = 0.05)
H
(km)
D
(n km
−1
)
TTI rivers
Little Wood River 6 0.39 202 (163–242) 0.84 (0.48–1.0) 571 13.1 44
Palm River 6 0.58 70 (58–81) 0.69 (0.42–0.93) 196 9.2 21
Blackwater River 6 0.67 42 (1–83) 0.64 (0.28–0.87) 118 9.2 13
92 Canal East 6 0.79 41 (28–55) 0.86 (0.60–1.0) 116 10.4 11
Pumpkin River 5 0.43 38 (1462) 0.81 (0.52–1.0) 106 8.5 12
Faka Union Canal 5 0.26 12 (2–22) 0.32 (0.160.60) 24 10.6 2
92 Canal West 5 0.72 10 (8–36) 0.64 (0.230.88) 27 10.4 3
Wood River* 5 5 (0–20) 14 5.4 3
Whitney River* 6 3 (0–20) 8 8.2 1
Ferguson River* 3 3 (0–20) 8 10.7 1
ENP rivers
Harney River* 2 26 (18–36) 74 15.9 5
Broad River* 2 18 (7–29) 52 15.8 3
Shark River* 2 3 (0–20)
8 12.2 1
Roberts River* 2 0 0 13.7 0
Lostmans River* 2 0 0 7.8 0
North Prong* 2 0 0 12.1 0
TTI mangrove islands
Remuda Ranch Pass 4 0.42 31 (13–158) 1.0 (0.57–1.0) 82 2.0 41
Russell Key Pass 7 0.80 31 (15–117) 0.78 (0.32–1.0) 82 3.0 27
Fakahatchee Pass 5 0.75 18 (12–58) 0.61 (0.22–0.93) 49 3.2 15
Rabbit Key Pass 7 0.86 23 (1370) 0.95 (0.53–0.97) 60 4.0 15
FB mangrove islands
Blackwater Sound* 2 3 (0–20) 8 3.6 2
Little Buttonwood S* 2 0 0 4.3 0
E. Bob Allen Key* 2 0 0 2.3 0
Black Betsey Key* 2 0 0 5.3 0
*Absolute abundance estimate based on catch-per-unit-effort linear-regression model (Y = 7.9 + 5.1X).
around islands. at, combined with strong site fidelity (see below), suggests that
juveniles remained near settlement sites in both systems. e second assumption
is justified because between sampling years at each site, we observed similar J-S ab-
solute abundances, suggesting a similar year-class size among years, especially in
rivers where highly selective crab-trap gear was used. For rivers, the mean absolute
abundances for 1999 and 2000 were: 217 and 193 for Littlewood; 64 and 73 for Palm;
33 and 42 for Blackwater; 37 and 39 for Pumpkin; and 48 and 37 for 92 Canal East.
For island sites, the mean absolute abundances for 1998 and 1999 were: 28 and 33 for
Remuda Ranch; 18 and 18 for Fakahatchee; 34 and 17 for Rabbit Key; and 36 and 28
for Russell Key. e third assumption is probably unjustified because young (small)
fish likely experience higher mortality rates than older (larger) sh, which is a general
KOENIG ET AL.: JUVENILE GOLIATH GROUPER HABITAT
577
pattern (Roff, 1992). Because we have no way of estimating size-specific mortality, we
used the Kaplan-Meier estimate of annual mortality, M = 0.05, which was observed
on telemetered fish from about 400 to 1000 mm TL.
Survival.e proportion (α) of marked juvenile goliath grouper increased over
the course of the study to a maximum that usually exceeded 0.5 (Table 2), suggesting
high survival of marked fish, which was further supported by monitoring teleme-
tered sh. e survival probability of TTI mangrove island sh (mean = 0.835) and
river fish (mean = 0.727) did not differ significantly in J-S 30-d survival probability
(ANOVA, P > 0.05, Table 2).
Two of the transmitters implanted in sh malfunctioned (could not be detected
upon release), and three others were never detected after the initial check. e re-
maining 17 fish were monitored for 34 mo, and Kaplan-Meier survival was estimated
on those sh. e 30-d survival rate was 0.995 (95% CL = 0.9851.00); annual sur-
vival rate was 0.947 (95% CL = 0.8341.00).
Habitat Association, Home Range, and Density.Observations of telemetered ju-
veniles showed that they were strongly associated with structure (mangrove under-
cuts and root curtains, submerged mangrove branches or trees, and rocky outcrops).
ey also showed patchy distributions in both rivers and around islands (mean CD
for islands = 5.3 and rivers = 3.0). Because structure is associated with shoreline, we
used a linear measure (number km
–1
shoreline) as the basis for density estimation.
Recaptured juveniles showed high site fidelity; over 90% moved no farther than
0.5 km during the entire sampling period. Straight-line home ranges for telemetered
fish in rivers averaged 586 m (radius = 293 m) and those around mangrove islands,
170 m (radius = 85 m; Table 3). Home range estimates served as the basis for density
estimation.
Mean densities around mangrove islands (25 km
–1
, SE = 6.2, CV = 0.5) were sig-
nificantly greater and less variable than those in rivers (11 km
–1
, SE = 4.2, CV = 1.2)
(Table 2).
Figure 5. Linear regression of absolute abundance on catch per unit effort (CPUE; individuals
per trap set) for trap-caught goliath grouper, Epinephelus itajara, in rivers of the Ten Thousand
Islands: Blackwater River, Palm River, Pumpkin River, Faka Union Canal, 92 Canal West, and
92 Canal East. Mean values for 1999 and 2000. Regression model: Y = −7.9 + 5.1X (R
2
= 0.89).
Dashed lines represent 95% condence boundaries.
BULLETIN OF MARINE SCIENCE, VOL. 80, NO. 3, 2007
578
Water Condition.—Fish densities in all TTI rivers and mangrove islands were neg-
atively correlated with low salinity (Correlation, P < 0.05) and with low salinity in
concert with low DO (Correlation, P < 0.01) (Fig. 6), but not with low DO alone (P =
0.07). Low densities in FB were not correlated with low DO or salinity (Table 4).
Adult Abundance.—Offshore adult abundance (from REEF surveys) was positively
correlated with the quantity of mangrove shoreline along the Florida coast (Logistic
Regression, P < 0.001, R
2
= 0.83; Table 5, Fig. 7). A stronger relationship (R
2
= 0.92)
resulted if the Florida Keys were excluded—exclusion was justified by the low pro-
portion of goliath-grouper sightings (4% of 14,386 observations) and the poor water
quality around the Keys (Kruczynski, 1999). Adult abundance was negatively related
to seagrass abundance (Logistic Regression, P < 0.001, R
2
=0.75).
D
Beck et al. (2001) refined the definition of nursery habitat in such a way that dem-
onstrating nursery function for a particular species requires that researchers evaluate
density, survival, growth, and above all, the contribution of the habitat to the produc-
tion of the adult population. Other than this study, there are virtually no published
studies that have unequivocally demonstrated a nursery function of mangroves for
fishes according to this definition (Faunce and Serafy, 2006).
is study clearly demonstrates that mangroves can only provide important nurs-
ery habitat for juvenile goliath grouper when local environmental conditions are
suitable. Rivers are more likely than mangrove islands to experience frequent hy-
poxic (DO < 3 mg L
–1
) or low-salinity (< 5) conditions because they drain upland ar-
Table 3. Home-range estimates of telemetered juvenile goliath grouper, Epinephelus itajara, in
the Ten Thousand Islands rivers and mangrove islands, southwest Florida, USA. Ranges are mea-
sured linearly, in kilometers of mangrove shoreline.
Location Fish size at
tagging (mm TL)
Times observed Observation period
(months)
Maximum distance
traversed (m)
Rivers
Little Wood R. 555 22 20 259
543 20 18 611
Palm R. 438 18 12 926
620 10 19 315
579 24 20 818
Mean home range 586
Mangrove islands
Rabbitt Key 610 6 26 340
640 9 16 350
Russell Key 909 4 10 197
825 2 9 86
580 4 16 100
Fakahatchee 695 9 25 50
805 4 15 67
580 5 25 86
Pumpkin Bay 508 8 13 100
559 16 31 320
Mean home range 170
KOENIG ET AL.: JUVENILE GOLIATH GROUPER HABITAT
579
eas, include man-made canals, and are impacted more acutely by upland freshwater
management projects that occur throughout this area (Ogden et al., 2005). us, it
is not surprising to nd in rivers that juveniles occur at lower densities, experience
slower growth rates, and have greater home ranges than island sh—keeping in mind
that density may be influenced by the availability of structure (Frias-Torres, 2006),
and growth rates may be affected by food availability.
e near lack of juveniles in FB is best explained by the bays long-standing de-
graded state, characterized by periods of hypersaline and high-nutrient conditions;
periodic toxic phytoplankton blooms; and significant seagrass, sponge, and man-
grove die-offs (Boyer et al., 1999; Fourqurean and Robblee, 1999). ese conditions
and events probably affected nursery function (Butler et al., 1995), although other
factors, such as limited larval delivery and lack of microhabitat features, cannot be
ruled out.
Nursery habitat is expected to promote survival in part by providing refuge from
predation. While mangrove habitat is rife with possible predators of juvenile goliath
grouper—including gray snapper (Lutjanus griseus Linnaeus, 1758), snook [Centro-
pomus undecimalis (Bloch, 1792)], red drum [Sciaenops ocellatus (Linnaeus, 1766)],
and gag [Mycteroperca microlepis (Goode and Bean, 1879)], as well as bull sharks
[Carcharhinus leucas (Müller and Henle, 1839)], and lemon sharks [Negaprion brevi-
rostris (Poey, 1868)]—it also is structurally complex, providing significant refugia.
Measuring survival is problematic. We found that the J-S method routinely un-
derestimated survival in goliath grouper because sh loss due to emigration or es-
capement was indistinguishable from sh loss due to mortality. e Kaplan-Meier
method minimizes these biases, and therefore provides a more realistic estimate.
Indeed, the Kaplan-Meier survival estimate is quite high (annual rate = 0.947, 95%
Figure 6. Relationship between density (number km
–1
of mangrove shoreline) of juvenile goliath
grouper, Epinephelus itajara, and dissolved oxygen and salinity minima (percent of monthly
sampled dissolved oxygen and salinity measures collected top and bottom from 1997 to 2001,
total of about 120 samples, below 3.0 mg L
–1
and 5, respectively), in the Ten Thousand Islands and
Everglades National Park rivers and mangrove islands. Negative correlations for dissolved oxygen
and salinity minima are P = 0.07 and P = 0.03, respectively.
BULLETIN OF MARINE SCIENCE, VOL. 80, NO. 3, 2007
580
CL = 0.8341.00), and thus strengthens confidence that the marked (= telemetered)
population adequately represents the unmarked population, an important consider-
ation in any mark-recapture study.
e most important criterion for determining the nursery status of a particular
habitat is its contribution to the adult population relative to that of other juvenile
habitats occupied by the particular species (Beck et al., 2001). e fact is that juve-
nile goliath grouper only rarely occur in any other habitats besides mangroves. No
juveniles were collected in intensive inshore surveys of seagrass beds (> 2500 trawl
tows and gillnet sets by Coleman et al., 1993, 1994; ayer et al., 1999; Fitzhugh et
al., 2005) and mud bottom (~500 trawl tows by Coleman et al., 1993, 1994) from the
Florida panhandle to Florida Bay. Only three of 143 juvenile sightings reported to the
FWC hotline occurred in habitat other than mangroves, including one offshore, one
in seagrass about 100 m from a mangrove coastline, and one in concrete rubble near
a river mouth. Further, anecdotal information from interviews with long-time local
Table 4. Dissolved oxygen, salinity, and the density of juvenile goliath grouper, Epinephelus itajara,
in mangroves at Ten Thousand Islands (TTI), Everglades National Park (ENP), and Florida Bay (FB)
water-quality stations. Density estimated for all juveniles 201,000 mm TL (ages 0–5). DO min =
percentage of monthly dissolved oxygen observations below 3 mg L
–1
. Salinity min = percentage of
monthly salinity observations below 5; max = percentage of monthly salinity observations above 40.
Density was measured as individuals per km of shoreline.
Salinity
Location Station DO min Minimum Maximum Density
Rivers
Littlewood River TTI 72 2.5 0.0 3.4 44
Palm River TTI 75 15.0 2.6 0.0 21
Blackwater River TTI 75 15.0 2.6 0.0 13
Pumpkin River TTI 72 2.5 0.0 3.4 12
92 canal E TTI 75 15.0 2.6 0.0 11
Harney River FLAB 36 10.0 0.0 0.0 5
92 Canal W TTI 75 15.0 2.6 0.0 3
Wood River TTI 70 8.6 15.5 3.4 3
Faka Union Canal TTI 70 8.6 15.5 3.4 3
Broad River FLAB 35 5.1 13.0 0.0 3
Whitney River TTI 75 15.0 2.6 0.0 1
Ferguson River TTI 64 16.0 12.0 1.7 1
Shark River FLAB 39 28.0 37.0 0.0 1
Lostmans River FLAB 29 0.0 20.0 0.0 0
Roberts River FLAB 47 0.0 39.0 0.0 0
North Prong River FLAB 38 11.2 74.3 0.0 0
TTI mangrove islands
Remuda Ranch TTI 74 2.1 0.0 0.0 41
Russell Key TTI 65 0.0 0.0 2.5 27
Fakahatchee TTI 69 1.7 1.7 2.5 15
Rabbit Key TTI 52 0.0 0.0 2.6 15
FB mangrove islands
Blackwater Sound FLAB 05 0.0 0.0 0.0 2
E. Bob Allen Keys FLAB 21 0.0 0.0 17.1 0
Little Buttonwood Sound FLAB 05 0.0 0.0 0.0 0
Black Betsey Key FLAB 23 0.0 0.0 0.0 0
KOENIG ET AL.: JUVENILE GOLIATH GROUPER HABITAT
581
fishermen revealed that mangrove-associated goliath grouper are exclusively juve-
niles (i.e., < 1000 mm TL) (L. Demere, Chokoloskee, FL shing guide and third gen-
eration fisherman), and that offshore reef-associated goliath grouper are virtually all
adults (i.e., > 1000 mm TL) (D. DeMaria, Key West, FL commercial spearsher who
targeted goliath grouper before 1990; Porch and Eklund, 2004). Indeed, the cover
provided by habitat types other than mangroves is insufficient for a fish that reaches
a meter in length.
Demonstrating connectivity between nursery and adult habitats for a protected
species such as goliath grouper is more difficult in the absence of a regular monitor-
ing program. In this study, we opted to compare regional abundance of adult goliath
grouper offshore with the quantity of mangrove shoreline immediately inshore of
sampled populations. (We assumed that the local population, still being in the re-
covery phase, had not reached the carrying capacity that would force population
expansion to neighboring lower-density areas.) e relationship between adult abun-
dance and quantity of mangrove shoreline is strongly positive and corroborates the
contention that southwest Florida is the center of goliath grouper abundance in the
southeastern United States (see Sadovy and Eklund, 1999; Porch and Eklund, 2004).
Emigration of juvenile goliath grouper occurred in 5- to 6-yr-olds at about 1000
mm TL, just under the size of maturity estimated by Bullock et al. (1992): 11001150
mm TL for males; 1200–1350 mm TL for females. Emigration is more likely to be
size rather than age dependent, given that size-at-age became increasingly more vari-
able over time and that sh left the estuary at about one meter TL regardless of age
(Table 1). A seasonal cue such as temperature is unlikely to trigger egress in goliath
grouper as it appears to in gag (see, e.g., Koenig and Coleman, 1998) because juvenile
goliath grouper remain in mangroves for years, whereas gag leave their nursery habi-
tat during the first fall season of residency.
Mangrove habitat suitable as goliath grouper nursery in the South Florida Ecosys-
tem was probably much more abundant and widespread a century ago than it is now,
extending at least from Indian River Lagoon on the east coast to the Caloosahatchee
estuary on the west coast, including Biscayne and Florida bays (Ogden et al., 2005).
Human activity has had an enormous impact, including that caused by water man-
agement, agriculture, industrial and housing developments, roadways, and mosquito
abatement, resulting in major changes in the timing, quantity, and quality of fresh-
water flows into the estuary. Goliath grouper is only one of a diverse array of species
Table 5. Distributions of adult goliath grouper Epinephelus itajara sightings offshore (1993–2004)
and the extent of mangrove shoreline and seagrass area inshore in all Florida coastal regions, from
Reef Environmental Education Foundation surveys. % = (no. sightings/no. surveys) × 100.
Location (as marked in Fig. 1A) No.
sightings
No.
surveys
% Mangrove
shoreline (km)
Seagrass
(km
2
)
Gulf of Mexico Coast
Northwest Florida 36 322 11 48 2,778
Central West Florida 105 332 32 2,778 307
Southwest Florida (with Florida Bay) 365 535 68 8,752 1,538
Florida Keys 640 14,386 4 2,584 2,862
Atlantic Coast
NE Florida to Canaveral 33 170 19 1,065 217
Canaveral to Jupiter 61 765 8 545 71
Jupiter to Biscayne 170 4,498 4 532 2,018
BULLETIN OF MARINE SCIENCE, VOL. 80, NO. 3, 2007
582
affected by these hydrologic and water quality alterations (Sklar and Browder, 1998;
Ogden et al., 2005).
In mangrove habitat, goliath grouper appear to be intolerant of large and/or highly
variable flows of fresh water, but conditions of low DO, other water quality factors,
and episodic events such as red tide, possibly stimulated by enhanced nutrient loads,
undoubtedly affect the suitability of the mangrove nursery. Additional studies are
needed to determine the productivity of other South Florida mangrove habitat for
goliath grouper (and other species) and to define the various factors affecting density,
growth, and home range including interactions of water quality, food availability,
microhabitat features.
In addition to reduced mangrove habitat quality in the South Florida system, di-
rect mangrove loss is occurring. Current mangrove coverage (~2174 km
2
,
based on
FWRI data) represents a significant reduction from coverage that existed 100 yrs ago,
before significant human-induced changes in the system (Johnson, 1974; Gilmore
and Snedaker, 1993; Sklar and Browder, 1998; Ogden et al., 2005). e most recent
losses (between 1986 and 1997) include 3.3% (from 366 to 354 km
2
) for FB and 28%
(from 259 km
2
to 186 km
2
) for TTI (Fig. 8). Worldwide, mangrove ecosystems have
declined by ~35% since the 1980s, primarily because of mariculture in third-world
countries (Mendelssohn and Mckee, 2000; Valiela et al., 2001).
Our data suggest that availability of suitable mangrove habitat is the primary bot-
tleneck to goliath grouper production, making suitable mangrove habitat not only
essential, as defined by the Sustainable Fisheries Act, but critical in the sense defined
by the U.S. Endangered Species Act (16 U.S.C. Section 1531 et seq.). Given that nearly
75% of Florida’s human population lives in coastal counties, that the population is
expected to increase by 9 million people in the next 25 yrs (Florida Office of Eco-
nomic and Demographic Research, http://edr.state.fl.us/population.htm), and that
mangrove losses of 20% are expected in the next 50 yrs (J.U., unpubl. data), we con-
tend that to be effective, any recovery plan for this species should include protection
and restoration of mangrove nursery habitat, which in turn depends in large part
on restoration of defining characteristics” (Ogden et al., 2005) of the South Florida
ecosystem.
Figure 7. Logistic regression of proportion of REEF surveys with adult goliath grouper (proxy for
offshore adult abundance) on kilometers of mangrove shoreline for coastal regions of Florida (P
< 0.001, R
2
= 0.83).
KOENIG ET AL.: JUVENILE GOLIATH GROUPER HABITAT
583
A
We thank L. Demere (Chokoloskee, FL), J. and B. White (Chokoloskee, FL), and T. Schmidt
(National Park Service) for habitat information. M. Finn (Goodland, FL), D. DeMaria (Key
West, FL), T. Bevis (Florida State University), J. Brusher (NMFS, Panama City) provided tech-
nical assistance; H. Norris and N. Morton (FWC, FWRI) provided data on mangrove distribu-
tion. J. Dodrill, B. Horn, and K. Mille (FWC) provided data on goliath grouper abundance. e
FWC Florida Wildlife Research Institute supported the tagging hotline. e Ocean Conser-
vancy provided posters. We acknowledge grants from the NMFS Office of Protected Species,
the NMFS Office of Habitat, the Curtis and Edith Munson Foundation, the National Fish and
Wildlife Foundation, and e Pew Fellows Program in Marine Conservation (to F.C.C.). We
also thank A. B. istle for formatting and editing the manuscript. is research was con-
ducted under the guidelines of the Florida State University Animal Care and Use Commit-
tee and under permits from the Florida Fish and Wildlife Conservation Commission. is is
Contribution No. 1109 of the Florida State University Coastal and Marine Laboratory.
L C
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A: (C.C.K., F.C.C.) Florida State University Coastal and Marine Laboratory, St. Te-
resa, Florida 32858-2702. (A.M.E., J.S.) NOAA-Fisheries, Southeast Fisheries Science Center,
Division of Protected Resources and Biodiversity, 75 Virginia Beach Drive, Miami, Florida
33149. (J.U.) Department of Geography, Clippinger Lab 122, Ohio University, Athens, Ohio
45701. C A: (C.C.K.): E-mail: <koenig@bio.fsu.edu>.